Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13285 and 13286 are separated by 156 nucleotides13286 and 13287 are separated by 371 nucleotides13287 and 13288 are separated by 749 nucleotides13288 and 13289 are separated by 507 nucleotides mRNA_4917: 13285 - KOG2920 Predicted methyltransferase, at 1,300,079 to 1,301,093 13285 mRNA_4918: 13286 - K00327 POR NADPH-ferrihemoprotein reductase, at 1,301,250 to 1,303,860 13286 mRNA_4919: 13287 - K01768 E4.6.1.1 adenylate cyclase, at 1,304,232 to 1,310,691 13287 mRNA_4920: 13288 - K01807 rpiA ribose 5-phosphate isomerase A, at 1,311,441 to 1,312,877 13288 mRNA_4921: 13289 - K12156 CYP83A1 cytochrome P450, family 83, subfamily A, polypeptide 1, at 1,313,385 to 1,315,387 13289
Group Condition mRNA_4917 mRNA_4918 mRNA_4919 mRNA_4920 mRNA_4921
13285 13286 13287 13288 13289
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 N.D. -0.5 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.4 N.D. -0.7
growth on ypd YPD -1.0 N.D. +0.1 N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 N.D. +0.7 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. +0.4 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.2 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.1 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 N.D. +0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.6 N.D. -0.2
auxotrophy YNB Glucose +0.4 N.D. +0.7 N.D. +0.2
auxotrophy Dropout Complete +0.3 N.D. +0.7 N.D. +0.2
growth on oleic acid YNB Glucose +0.5 N.D. +0.4 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 N.D. +0.3 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.4 N.D. +0.7 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.8 N.D. +0.7 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.8 N.D. +0.3 N.D. +0.4
growth on ricinoleic acid YNB Glucose +0.9 N.D. +0.7 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.8 N.D. +0.8 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 N.D. +1.0 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.9 N.D. +1.2 N.D. +0.5
remove
mRNA_4917
plot
remove
mRNA_4918
plot
remove
mRNA_4919
remove
mRNA_4920
plot
remove
mRNA_4921
plot