Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13287 and 13288 are separated by 749 nucleotides13288 and 13289 are separated by 507 nucleotides13289 and 13290 are separated by 426 nucleotides13290 and 13291 are separated by 346 nucleotides mRNA_4919: 13287 - K01768 E4.6.1.1 adenylate cyclase, at 1,304,232 to 1,310,691 13287 mRNA_4920: 13288 - K01807 rpiA ribose 5-phosphate isomerase A, at 1,311,441 to 1,312,877 13288 mRNA_4921: 13289 - K12156 CYP83A1 cytochrome P450, family 83, subfamily A, polypeptide 1, at 1,313,385 to 1,315,387 13289 mRNA_4922: 13290 - K18670 YAK1 dual specificity protein kinase YAK1, at 1,315,814 to 1,320,351 13290 mRNA_4923: 13291 - K03141 TFIIH1, GTF2H1, TFB1 transcription initiation factor TFIIH subunit 1, at 1,320,698 to 1,323,090 13291
Group Condition mRNA_4919 mRNA_4920 mRNA_4921 mRNA_4922 mRNA_4923
13287 13288 13289 13290 13291
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. +0.4 -1.7 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. +0.0 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -0.7 +0.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. +0.2 -0.8 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.0 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. -0.2 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.3 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.2 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 N.D. -0.0 -0.2 N.D.
growth on ypd YPD +0.1 N.D. +0.4 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.7 N.D. +0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. +0.1 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.7 N.D. +0.2 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.8 N.D. -0.0 -0.1 N.D.
growth on oleic acid YNB Glucose +0.4 N.D. +0.4 -0.1 N.D.
auxotrophy YNB Glucose +0.7 N.D. +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.7 N.D. +0.0 +0.1 N.D.
auxotrophy Dropout Complete +0.7 N.D. +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 N.D. +0.5 -0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 N.D. +0.2 +0.2 N.D.
remove
mRNA_4919
plot
remove
mRNA_4920
plot
remove
mRNA_4921
remove
mRNA_4922
plot
remove
mRNA_4923
plot