Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13290 and 13291 are separated by 346 nucleotides13291 and 13292 are separated by 124 nucleotides13292 and 13293 are separated by 286 nucleotides13293 and 13294 are separated by 87 nucleotides mRNA_4922: 13290 - K18670 YAK1 dual specificity protein kinase YAK1, at 1,315,814 to 1,320,351 13290 mRNA_4923: 13291 - K03141 TFIIH1, GTF2H1, TFB1 transcription initiation factor TFIIH subunit 1, at 1,320,698 to 1,323,090 13291 mRNA_4924: 13292 - KOG3012 Uncharacterized conserved protein, at 1,323,215 to 1,324,561 13292 mRNA_4925: 13293 - ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 1,324,848 to 1,328,229 13293 mRNA_4926: 13294 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013, at 1,328,317 to 1,334,558 13294
Group Condition mRNA_4922 mRNA_4923 mRNA_4924 mRNA_4925 mRNA_4926
13290 13291 13292 13293 13294
facs on lipid accumulation Sorted High BODIPY Gate -1.7 N.D. -0.6 -0.5 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -0.6 -0.7 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 N.D. +0.4 -1.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.3 -0.9 +0.2
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.4 -0.3 +0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.6 -0.5 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -0.6 -0.4 +0.1
growth on ypd YPD -0.0 N.D. -0.3 -0.5 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.1 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.0 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.5 N.D. -0.1 -0.7 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.3 +0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.4 +0.5 +0.1
growth on oleic acid YNB Glucose -0.1 N.D. +0.1 +0.2 +0.0
auxotrophy YNB Glucose -0.1 N.D. -0.2 +0.4 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.3 +0.5 +0.3
auxotrophy Dropout Complete +0.1 N.D. -0.1 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -0.4 +1.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.2 +1.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.3 +1.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.9 N.D. -0.0 +1.0 -0.2
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