Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13294 and 13295 are separated by 201 nucleotides13295 and 13296 are separated by 182 nucleotides13296 and 13297 are separated by 564 nucleotides13297 and 13298 are separated by 326 nucleotides mRNA_4926: 13294 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013, at 1,328,317 to 1,334,558 13294 mRNA_4927: 13295 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 1,334,760 to 1,336,928 13295 mRNA_4928: 13296 - HMMPfam-Transient receptor potential (TRP) ion channel-PF06011,HMMPfam-ML-like domain-PF14558, at 1,337,111 to 1,340,226 13296 mRNA_4929: 13297 - K01956 carA, CPA1 carbamoyl-phosphate synthase small subunit, at 1,340,791 to 1,342,395 13297 mRNA_4930: 13298 - HMMPfam-Ubiquitin family-PF00240,HMMPfam-BAG domain-PF02179,ProSiteProfiles-Ubiquitin domain profile.-PS50053,ProSiteProfiles-BAG domain profile.-PS51035,SMART-BAG domains, present in regulator of Hsp70 proteins-SM00264,SUPERFAMILY--SSF54236,SUPERFAMILY--SSF63491, at 1,342,722 to 1,344,500 13298
Group Condition mRNA_4926 mRNA_4927 mRNA_4928 mRNA_4929 mRNA_4930
13294 13295 13296 13297 13298
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -1.2 -0.1 -3.4 -0.6
growth on oleic acid YNB Glucose +0.0 -0.6 -0.3 -4.4 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 -0.6 -4.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5 -0.0 -3.3 -0.4
auxotrophy YNB Glucose +0.2 +0.4 -0.7 -3.8 -0.4
growth on oleic acid YNB Oleic Acid +0.1 -0.6 -0.3 -3.5 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 -0.5 -3.9 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 -0.2 -3.8 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.4 -0.5 -3.2 -0.4
growth on ricinoleic acid YNB Glucose +0.1 -0.2 -0.5 -3.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.2 -0.4 -2.8 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.6 +0.3 -2.6 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.9 +0.4 -2.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 -0.1 -2.4 -0.3
auxotrophy Dropout Complete +0.1 +0.4 -1.0 -0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.0 +0.3 -1.4 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.0 -0.5 +0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.2 -0.1 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 +0.1 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 +0.0 +0.0 +0.1
growth on ypd YPD +0.2 +0.6 -0.2 +0.2 +0.2
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