Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13298 and 13299 are separated by 333 nucleotides13299 and 13300 are separated by 499 nucleotides13300 and 13301 are separated by 338 nucleotides13301 and 13302 are separated by 207 nucleotides mRNA_4930: 13298 - HMMPfam-Ubiquitin family-PF00240,HMMPfam-BAG domain-PF02179,ProSiteProfiles-Ubiquitin domain profile.-PS50053,ProSiteProfiles-BAG domain profile.-PS51035,SMART-BAG domains, present in regulator of Hsp70 proteins-SM00264,SUPERFAMILY--SSF54236,SUPERFAMILY--SSF63491, at 1,342,722 to 1,344,500 13298 mRNA_4931: 13299 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,344,834 to 1,346,285 13299 mRNA_4932: 13300 - K11547 NDC80, HEC1, TID3 kinetochore protein NDC80, at 1,346,785 to 1,349,520 13300 mRNA_4933: 13301 - K14972 PAXIP1, PTIP PAX-interacting protein 1, at 1,349,859 to 1,354,237 13301 mRNA_4934: 13302 - K00611 OTC, argF, argI ornithine carbamoyltransferase, at 1,354,445 to 1,355,871 13302
Group Condition mRNA_4930 mRNA_4931 mRNA_4932 mRNA_4933 mRNA_4934
13298 13299 13300 13301 13302
auxotrophy YNB Glucose -0.4 +0.3 N.D. +0.1 -4.3
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.4 N.D. -0.5 -2.2
growth on ricinoleic acid YNB Glucose +0.2 +0.1 N.D. +0.0 -3.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 N.D. -0.1 -2.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.0 N.D. -0.4 -1.9
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.0 N.D. -0.2 -2.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 N.D. +0.0 -3.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.1 N.D. -0.2 -3.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 N.D. +0.2 -2.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 N.D. -0.2 -2.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 N.D. +0.1 -2.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.5 N.D. -0.2 -2.7
growth on oleic acid YNB Oleic Acid -0.0 +0.0 N.D. -0.0 -2.2
growth on oleic acid YNB Glucose +0.5 +0.3 N.D. +0.0 -2.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 N.D. +0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 N.D. -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 N.D. -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 N.D. -0.1 -0.0
auxotrophy Dropout Complete -0.2 +0.2 N.D. +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.3 N.D. +0.2 +0.3
growth on ypd YPD +0.2 +0.4 N.D. -0.1 +0.1
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