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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13313 and 13314 are separated by 118 nucleotides
13314 and 13315 are separated by 124 nucleotides
13315 and 13316 are separated by 201 nucleotides
13316 and 13317 are separated by 283 nucleotides
mRNA_4945: 13313 - Hypothetical Protein, at 1,376,497 to 1,378,672
13313
mRNA_4946: 13314 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,378,791 to 1,380,023
13314
mRNA_4947: 13315 - K12584 DCPS, DCS m7GpppX diphosphatase, at 1,380,148 to 1,381,498
13315
mRNA_4948: 13316 - Hypothetical Protein, at 1,381,700 to 1,382,968
13316
mRNA_4949: 13317 - Hypothetical Protein, at 1,383,252 to 1,384,313
13317
Group
Condition
mRNA
_4945
mRNA
_4946
mRNA
_4947
mRNA
_4948
mRNA
_4949
13313
13314
13315
13316
13317
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.4
-0.0
-0.7
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.5
-0.2
-1.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.3
-0.1
-0.5
-0.2
auxotrophy
Dropout Complete
-0.2
-0.6
+0.3
+0.1
-0.3
growth on ricinoleic acid
YNB Glucose
+0.0
-0.4
-0.0
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.2
+0.1
-0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
-0.0
+0.2
-0.9
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
+0.2
-0.4
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.4
+0.1
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.3
+0.1
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
+0.1
+0.5
-0.2
growth on oleic acid
YNB Oleic Acid
+0.1
-0.3
-0.1
+0.3
+0.1
growth on ypd
YPD
+0.2
+0.1
+0.1
-0.6
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
-0.2
+0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.2
+0.0
+0.5
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.5
+0.2
+0.4
+0.2
growth on oleic acid
YNB Glucose
+0.1
+0.2
+0.3
+0.0
-0.1
auxotrophy
YNB Glucose
+0.1
-0.0
+0.1
+0.7
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.5
+0.3
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.8
+0.2
-0.6
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.0
+0.8
-0.2
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