Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13314 and 13315 are separated by 124 nucleotides
13315 and 13316 are separated by 201 nucleotides
13316 and 13317 are separated by 283 nucleotides
13317 and 13318 are separated by 750 nucleotides
mRNA_4946: 13314 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,378,791 to 1,380,023
13314
mRNA_4947: 13315 - K12584 DCPS, DCS m7GpppX diphosphatase, at 1,380,148 to 1,381,498
13315
mRNA_4948: 13316 - Hypothetical Protein, at 1,381,700 to 1,382,968
13316
mRNA_4949: 13317 - Hypothetical Protein, at 1,383,252 to 1,384,313
13317
mRNA_4950: 13318 - K02878 RP-L16, MRPL16, rplP large subunit ribosomal protein L16, at 1,385,064 to 1,386,007
13318
Group
Condition
mRNA
_4946
mRNA
_4947
mRNA
_4948
mRNA
_4949
mRNA
_4950
13314
13315
13316
13317
13318
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.2
-1.2
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.0
-0.7
-0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.1
-0.5
-0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.2
-0.9
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.4
-0.0
-0.2
-0.1
N.D.
auxotrophy
Dropout Complete
-0.6
+0.3
+0.1
-0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
-0.5
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
-0.4
+0.2
N.D.
growth on ypd
YPD
+0.1
+0.1
-0.6
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
+0.3
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.4
+0.1
-0.5
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.0
+0.5
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
+0.5
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.1
-0.4
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.2
+0.0
+0.2
N.D.
growth on oleic acid
YNB Glucose
+0.2
+0.3
+0.0
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.2
+0.4
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
+0.2
-0.6
+0.2
N.D.
auxotrophy
YNB Glucose
-0.0
+0.1
+0.7
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.3
-0.2
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.0
+0.8
-0.2
N.D.
remove
mRNA_4946
plot
remove
mRNA_4947
plot
remove
mRNA_4948
remove
mRNA_4949
plot
remove
mRNA_4950
plot