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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13315 and 13316 are separated by 201 nucleotides
13316 and 13317 are separated by 283 nucleotides
13317 and 13318 are separated by 750 nucleotides
13318 and 13319 are separated by 169 nucleotides
mRNA_4947: 13315 - K12584 DCPS, DCS m7GpppX diphosphatase, at 1,380,148 to 1,381,498
13315
mRNA_4948: 13316 - Hypothetical Protein, at 1,381,700 to 1,382,968
13316
mRNA_4949: 13317 - Hypothetical Protein, at 1,383,252 to 1,384,313
13317
mRNA_4950: 13318 - K02878 RP-L16, MRPL16, rplP large subunit ribosomal protein L16, at 1,385,064 to 1,386,007
13318
mRNA_4951: 13319 - K15114 ORT1 mitochondrial ornithine carrier protein, at 1,386,177 to 1,387,405
13319
Group
Condition
mRNA
_4947
mRNA
_4948
mRNA
_4949
mRNA
_4950
mRNA
_4951
13315
13316
13317
13318
13319
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-1.2
-0.1
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.7
-0.1
N.D.
-0.5
growth on ricinoleic acid
YNB Glucose
-0.0
-0.2
-0.1
N.D.
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.5
-0.2
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.6
+0.2
N.D.
-0.8
auxotrophy
YNB Glucose
+0.1
+0.7
-0.2
N.D.
-1.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.4
+0.1
N.D.
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.9
-0.2
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.3
+0.0
-0.1
N.D.
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.4
+0.2
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.5
-0.2
N.D.
-0.9
growth on ypd
YPD
+0.1
-0.6
+0.3
N.D.
-0.2
auxotrophy
Dropout Complete
+0.3
+0.1
-0.3
N.D.
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.5
-0.1
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.5
-0.1
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.5
-0.3
N.D.
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
+0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.2
+0.1
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
-0.1
+0.3
+0.1
N.D.
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.4
+0.2
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.8
-0.2
N.D.
+0.3
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