Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13323 and 13324 are separated by 305 nucleotides13324 and 13325 are separated by 578 nucleotides13325 and 13326 are separated by 414 nucleotides13326 and 13327 are separated by 418 nucleotides mRNA_4955: 13323 - K20306 TRAPPC9, TRS120 trafficking protein particle complex subunit 9, at 1,393,172 to 1,398,147 13323 mRNA_4956: 13324 - HMMPfam-SMI1 / KNR4 family (SUKH-1)-PF09346, at 1,398,453 to 1,400,732 13324 mRNA_4957: 13325 - BLAST Ribonuclease P protein subunit p20 [Hypsizygus marmor..., at 1,401,311 to 1,402,401 13325 mRNA_4958: 13326 - K02519 infB, MTIF2 translation initiation factor IF-2, at 1,402,816 to 1,406,002 13326 mRNA_4959: 13327 - K08269 ULK1_2_3, ATG1 serine/threonine-protein kinase ULK/ATG1, at 1,406,421 to 1,410,214 13327
Group Condition mRNA_4955 mRNA_4956 mRNA_4957 mRNA_4958 mRNA_4959
13323 13324 13325 13326 13327
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -1.1 N.D. N.D. -1.3
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.5 N.D. N.D. -2.1
facs on lipid accumulation Sorted High BODIPY Gate +0.8 -0.4 N.D. N.D. -2.2
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.5 N.D. N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 N.D. N.D. -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.7 -0.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.8 N.D. N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.6 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.8 +0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.0 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.4 N.D. N.D. -0.3
auxotrophy YNB Glucose +0.3 -0.5 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.5 N.D. N.D. -0.0
growth on ypd YPD +0.2 +0.2 N.D. N.D. -0.4
growth on oleic acid YNB Glucose +0.4 +0.0 N.D. N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 N.D. N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +1.7 -0.9 N.D. N.D. -0.5
auxotrophy Dropout Complete +1.3 -0.3 N.D. N.D. -0.5
growth on ricinoleic acid YNB Glucose +1.2 -0.3 N.D. N.D. -0.4
growth on oleic acid YNB Oleic Acid +1.1 +0.0 N.D. N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +2.7 -0.9 N.D. N.D. -0.6
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