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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13325 and 13326 are separated by 414 nucleotides
13326 and 13327 are separated by 418 nucleotides
13327 and 13328 are separated by 508 nucleotides
13328 and 13329 are separated by 351 nucleotides
mRNA_4957: 13325 - BLAST Ribonuclease P protein subunit p20 [Hypsizygus marmor..., at 1,401,311 to 1,402,401
13325
mRNA_4958: 13326 - K02519 infB, MTIF2 translation initiation factor IF-2, at 1,402,816 to 1,406,002
13326
mRNA_4959: 13327 - K08269 ULK1_2_3, ATG1 serine/threonine-protein kinase ULK/ATG1, at 1,406,421 to 1,410,214
13327
mRNA_4960: 13328 - K00102 dld, LDHD D-lactate dehydrogenase (cytochrome), at 1,410,723 to 1,413,349
13328
mRNA_4961: 13329 - Hypothetical Protein, at 1,413,701 to 1,414,806
13329
Group
Condition
mRNA
_4957
mRNA
_4958
mRNA
_4959
mRNA
_4960
mRNA
_4961
13325
13326
13327
13328
13329
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-2.2
+0.0
-3.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.3
+0.4
-4.0
growth on ypd
YPD
N.D.
N.D.
-0.4
+0.0
-2.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-1.3
+0.1
-1.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.0
+0.0
-2.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.3
+0.1
-2.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-2.1
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.2
+0.0
-2.1
auxotrophy
Dropout Complete
N.D.
N.D.
-0.5
+0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.5
+0.1
+0.6
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.2
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.3
+0.3
+0.8
auxotrophy
YNB Glucose
N.D.
N.D.
-0.1
+0.3
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.4
+0.1
+1.4
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.2
+0.1
+1.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.4
+0.2
+1.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.3
+0.3
+1.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.1
+0.1
+1.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.6
+0.2
+1.7
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
+0.1
+1.6
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.1
+0.0
+1.7
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