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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13328 and 13329 are separated by 351 nucleotides
13329 and 13330 are separated by 1274 nucleotides
13330 and 13331 are separated by 626 nucleotides
13331 and 13332 are separated by 931 nucleotides
mRNA_4960: 13328 - K00102 dld, LDHD D-lactate dehydrogenase (cytochrome), at 1,410,723 to 1,413,349
13328
mRNA_4961: 13329 - Hypothetical Protein, at 1,413,701 to 1,414,806
13329
mRNA_4962: 13330 - Hypothetical Protein, at 1,416,081 to 1,416,742
13330
mRNA_4963: 13331 - Hypothetical Protein, at 1,417,369 to 1,418,489
13331
mRNA_4964: 13332 - K08334 BECN1, VPS30, ATG6 beclin 1, at 1,419,421 to 1,420,996
13332
Group
Condition
mRNA
_4960
mRNA
_4961
mRNA
_4962
mRNA
_4963
mRNA
_4964
13328
13329
13330
13331
13332
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-3.4
-0.4
+0.0
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-4.0
-0.1
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-2.4
+0.5
+0.2
+0.1
growth on ypd
YPD
+0.0
-2.5
+0.8
-0.5
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-2.5
+0.2
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-2.1
+0.5
+0.2
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.2
-0.5
+0.2
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+1.4
-0.2
-0.8
-1.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-1.2
+0.6
+0.3
-0.3
auxotrophy
Dropout Complete
+0.3
-0.3
+0.1
+0.2
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+1.6
-0.4
+0.0
-0.5
growth on oleic acid
YNB Glucose
+0.2
+0.3
+0.2
-0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+1.3
-0.2
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+1.7
-0.4
+0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.6
+0.3
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.8
+0.3
+0.0
+0.3
auxotrophy
YNB Glucose
+0.3
+0.7
+0.4
+0.3
+0.2
growth on ricinoleic acid
YNB Glucose
+0.2
+1.4
+0.4
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+1.2
+0.3
+0.4
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+1.7
+0.3
+0.5
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+1.2
+0.7
-0.2
+1.0
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