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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13329 and 13330 are separated by 1274 nucleotides
13330 and 13331 are separated by 626 nucleotides
13331 and 13332 are separated by 931 nucleotides
13332 and 13333 are separated by 717 nucleotides
mRNA_4961: 13329 - Hypothetical Protein, at 1,413,701 to 1,414,806
13329
mRNA_4962: 13330 - Hypothetical Protein, at 1,416,081 to 1,416,742
13330
mRNA_4963: 13331 - Hypothetical Protein, at 1,417,369 to 1,418,489
13331
mRNA_4964: 13332 - K08334 BECN1, VPS30, ATG6 beclin 1, at 1,419,421 to 1,420,996
13332
mRNA_4965: 13333 - K15156 MED14, RGR1 mediator of RNA polymerase II transcription subunit 14, at 1,421,714 to 1,425,387
13333
Group
Condition
mRNA
_4961
mRNA
_4962
mRNA
_4963
mRNA
_4964
mRNA
_4965
13329
13330
13331
13332
13333
facs on lipid accumulation
Sorted Low BODIPY Gate
-4.0
-0.1
+0.3
-0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-3.4
-0.4
+0.0
-0.3
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.5
+0.2
-0.8
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-2.4
+0.5
+0.2
+0.1
+0.2
growth on ypd
YPD
-2.5
+0.8
-0.5
+0.7
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+1.4
-0.2
-0.8
-1.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-2.5
+0.2
+0.1
+0.6
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-2.1
+0.5
+0.2
+0.4
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.2
+0.6
+0.3
-0.3
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+1.6
-0.4
+0.0
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.8
+0.3
+0.0
+0.3
-0.6
growth on oleic acid
YNB Glucose
+0.3
+0.2
-0.0
+0.2
+0.2
auxotrophy
Dropout Complete
-0.3
+0.1
+0.2
+0.4
+0.7
ypd buoyancy
40 hrs Median Buoyancy
+1.3
-0.2
-0.1
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
+0.3
+0.3
+0.2
-0.1
auxotrophy
YNB Glucose
+0.7
+0.4
+0.3
+0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
+1.7
-0.4
+0.0
+0.2
+0.4
growth on oleic acid
YNB Oleic Acid
+1.2
+0.7
-0.2
+1.0
-0.6
growth on ricinoleic acid
YNB Glucose
+1.4
+0.4
+0.1
+0.1
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+1.2
+0.3
+0.4
+0.4
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.7
+0.3
+0.5
-0.1
+0.6
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