Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13329 and 13330 are separated by 1274 nucleotides13330 and 13331 are separated by 626 nucleotides13331 and 13332 are separated by 931 nucleotides13332 and 13333 are separated by 717 nucleotides mRNA_4961: 13329 - Hypothetical Protein, at 1,413,701 to 1,414,806 13329 mRNA_4962: 13330 - Hypothetical Protein, at 1,416,081 to 1,416,742 13330 mRNA_4963: 13331 - Hypothetical Protein, at 1,417,369 to 1,418,489 13331 mRNA_4964: 13332 - K08334 BECN1, VPS30, ATG6 beclin 1, at 1,419,421 to 1,420,996 13332 mRNA_4965: 13333 - K15156 MED14, RGR1 mediator of RNA polymerase II transcription subunit 14, at 1,421,714 to 1,425,387 13333
Group Condition mRNA_4961 mRNA_4962 mRNA_4963 mRNA_4964 mRNA_4965
13329 13330 13331 13332 13333
facs on lipid accumulation Sorted Low BODIPY Gate -4.0 -0.1 +0.3 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -3.4 -0.4 +0.0 -0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.5 +0.2 -0.8 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.4 +0.5 +0.2 +0.1 +0.2
growth on ypd YPD -2.5 +0.8 -0.5 +0.7 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +1.4 -0.2 -0.8 -1.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -2.5 +0.2 +0.1 +0.6 +0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.1 +0.5 +0.2 +0.4 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.2 +0.6 +0.3 -0.3 +0.5
ypd buoyancy 40 hrs Low Buoyancy +1.6 -0.4 +0.0 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.8 +0.3 +0.0 +0.3 -0.6
growth on oleic acid YNB Glucose +0.3 +0.2 -0.0 +0.2 +0.2
auxotrophy Dropout Complete -0.3 +0.1 +0.2 +0.4 +0.7
ypd buoyancy 40 hrs Median Buoyancy +1.3 -0.2 -0.1 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.3 +0.3 +0.2 -0.1
auxotrophy YNB Glucose +0.7 +0.4 +0.3 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +1.7 -0.4 +0.0 +0.2 +0.4
growth on oleic acid YNB Oleic Acid +1.2 +0.7 -0.2 +1.0 -0.6
growth on ricinoleic acid YNB Glucose +1.4 +0.4 +0.1 +0.1 +0.5
auxotrophy YNB Glucose 75mM Arginine +1.2 +0.3 +0.4 +0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +1.7 +0.3 +0.5 -0.1 +0.6
remove
mRNA_4961
plot
remove
mRNA_4962
plot
remove
mRNA_4963
remove
mRNA_4964
plot
remove
mRNA_4965
plot