Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13330 and 13331 are separated by 626 nucleotides
13331 and 13332 are separated by 931 nucleotides
13332 and 13333 are separated by 717 nucleotides
13333 and 13334 are separated by 243 nucleotides
mRNA_4962: 13330 - Hypothetical Protein, at 1,416,081 to 1,416,742
13330
mRNA_4963: 13331 - Hypothetical Protein, at 1,417,369 to 1,418,489
13331
mRNA_4964: 13332 - K08334 BECN1, VPS30, ATG6 beclin 1, at 1,419,421 to 1,420,996
13332
mRNA_4965: 13333 - K15156 MED14, RGR1 mediator of RNA polymerase II transcription subunit 14, at 1,421,714 to 1,425,387
13333
mRNA_4966: 13334 - Hypothetical Protein, at 1,425,631 to 1,426,865
13334
Group
Condition
mRNA
_4962
mRNA
_4963
mRNA
_4964
mRNA
_4965
mRNA
_4966
13330
13331
13332
13333
13334
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.8
-1.1
-0.2
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.0
-0.5
-0.1
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
+0.2
-0.8
-0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.3
-0.3
-0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.0
+0.3
-0.6
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.0
-0.3
+0.0
+0.9
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
+0.1
+0.1
+0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.4
+0.4
+0.2
-0.5
growth on ricinoleic acid
YNB Glucose
+0.4
+0.1
+0.1
+0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.0
+0.2
+0.4
+0.7
auxotrophy
Dropout Complete
+0.1
+0.2
+0.4
+0.7
-0.4
growth on oleic acid
YNB Oleic Acid
+0.7
-0.2
+1.0
-0.6
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.3
+0.2
-0.1
+0.3
growth on oleic acid
YNB Glucose
+0.2
-0.0
+0.2
+0.2
+0.5
auxotrophy
YNB Glucose
+0.4
+0.3
+0.2
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.5
-0.1
+0.6
+0.4
growth on ypd
YPD
+0.8
-0.5
+0.7
+0.2
+1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.2
+0.1
+0.2
+3.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.1
+0.6
+0.9
+2.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
+0.3
-0.3
+0.5
+3.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.2
+0.4
+0.6
+3.1
remove
mRNA_4962
plot
remove
mRNA_4963
plot
remove
mRNA_4964
remove
mRNA_4965
plot
remove
mRNA_4966
plot