Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13334 and 13335 are separated by 874 nucleotides
13335 and 13336 are separated by 1123 nucleotides
13336 and 13337 are separated by 81 nucleotides
13337 and 13338 are separated by 426 nucleotides
mRNA_4966: 13334 - Hypothetical Protein, at 1,425,631 to 1,426,865
13334
mRNA_4967: 13335 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 1,427,740 to 1,431,350
13335
mRNA_4968: 13336 - KOG4464 Signaling protein RIC-8/synembryn (regulates neurotransmitter secretion), at 1,432,474 to 1,435,003
13336
mRNA_4969: 13337 - K20456 OSBP oxysterol-binding protein 1, at 1,435,085 to 1,439,408
13337
mRNA_4970: 13338 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1,439,835 to 1,441,343
13338
Group
Condition
mRNA
_4966
mRNA
_4967
mRNA
_4968
mRNA
_4969
mRNA
_4970
13334
13335
13336
13337
13338
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.2
+0.2
-0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
+0.2
-0.1
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.6
+0.2
+0.5
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.5
+0.0
+1.1
+0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.1
+0.4
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.6
+0.1
-0.1
+0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.0
+0.9
+0.3
+0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
+1.2
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.7
+0.2
+0.0
+0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.0
-0.2
+0.8
+0.3
+0.1
auxotrophy
Dropout Complete
-0.4
+0.2
+1.2
+0.2
-0.1
growth on ypd
YPD
+1.0
-0.1
+0.2
+0.4
-0.1
auxotrophy
YNB Glucose
+0.2
+0.1
+1.3
+0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.1
+1.7
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+3.1
-0.0
-0.9
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.2
+1.8
+0.2
-0.2
growth on oleic acid
YNB Glucose
+0.5
+0.1
+1.4
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.9
+0.5
+1.3
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+2.7
+0.1
+0.4
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+3.0
+0.1
+0.0
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+3.6
+0.1
+0.1
+0.2
+0.0
remove
mRNA_4966
plot
remove
mRNA_4967
plot
remove
mRNA_4968
remove
mRNA_4969
plot
remove
mRNA_4970
plot