Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13334 and 13335 are separated by 874 nucleotides13335 and 13336 are separated by 1123 nucleotides13336 and 13337 are separated by 81 nucleotides13337 and 13338 are separated by 426 nucleotides mRNA_4966: 13334 - Hypothetical Protein, at 1,425,631 to 1,426,865 13334 mRNA_4967: 13335 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 1,427,740 to 1,431,350 13335 mRNA_4968: 13336 - KOG4464 Signaling protein RIC-8/synembryn (regulates neurotransmitter secretion), at 1,432,474 to 1,435,003 13336 mRNA_4969: 13337 - K20456 OSBP oxysterol-binding protein 1, at 1,435,085 to 1,439,408 13337 mRNA_4970: 13338 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1,439,835 to 1,441,343 13338
Group Condition mRNA_4966 mRNA_4967 mRNA_4968 mRNA_4969 mRNA_4970
13334 13335 13336 13337 13338
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.2 +0.2 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.2 -0.1 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.6 +0.2 +0.5 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.0 +1.1 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 +0.4 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.6 +0.1 -0.1 +0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.0 +0.9 +0.3 +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.0 +1.2 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.7 +0.2 +0.0 +0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.0 -0.2 +0.8 +0.3 +0.1
auxotrophy Dropout Complete -0.4 +0.2 +1.2 +0.2 -0.1
growth on ypd YPD +1.0 -0.1 +0.2 +0.4 -0.1
auxotrophy YNB Glucose +0.2 +0.1 +1.3 +0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 +1.7 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +3.1 -0.0 -0.9 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.2 +1.8 +0.2 -0.2
growth on oleic acid YNB Glucose +0.5 +0.1 +1.4 +0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.9 +0.5 +1.3 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +2.7 +0.1 +0.4 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +3.0 +0.1 +0.0 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +3.6 +0.1 +0.1 +0.2 +0.0
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