Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13343 and 13344 are separated by 1447 nucleotides13344 and 13345 are separated by 1010 nucleotides13345 and 13346 are separated by 883 nucleotides13346 and 13347 are separated by 113 nucleotides mRNA_4975: 13343 - Hypothetical Protein, at 1,454,950 to 1,456,101 13343 mRNA_4976: 13344 - Hypothetical Protein, at 1,457,549 to 1,458,145 13344 mRNA_4977: 13345 - Hypothetical Protein, at 1,459,156 to 1,464,394 13345 mRNA_4978: 13346 - K12883 NCBP2, CBP20 nuclear cap-binding protein subunit 2, at 1,465,278 to 1,466,176 13346 mRNA_4979: 13347 - K03575 mutY A/G-specific adenine glycosylase, at 1,466,290 to 1,468,594 13347
Group Condition mRNA_4975 mRNA_4976 mRNA_4977 mRNA_4978 mRNA_4979
13343 13344 13345 13346 13347
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.1 -0.5 -1.0 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.3 -0.1 -1.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 +0.0 -1.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.2 -0.2 -0.7 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 +0.1 -0.3 -0.3
auxotrophy Dropout Complete -0.4 +0.0 +0.1 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 -0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -0.1 +0.2 -0.3
growth on ypd YPD +0.1 +0.0 -0.0 +0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.0 +0.0 -0.8 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.0 +0.1 -0.6 -0.1
auxotrophy YNB Glucose -0.1 -0.0 +0.2 +0.0 -0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.3 -0.0 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.2 +0.0 -0.5 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 -0.2 -0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.2 +0.3 -0.4 -0.1
growth on ricinoleic acid YNB Glucose +0.3 -0.0 +0.4 +0.0 -0.0
growth on oleic acid YNB Glucose +0.3 +0.2 +0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 +0.3 +0.3 -0.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.3 +0.1 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.3 -0.0 +1.2 +0.3
remove
mRNA_4975
plot
remove
mRNA_4976
plot
remove
mRNA_4977
remove
mRNA_4978
plot
remove
mRNA_4979
plot