Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13344 and 13345 are separated by 1010 nucleotides13345 and 13346 are separated by 883 nucleotides13346 and 13347 are separated by 113 nucleotides13347 and 13348 are separated by 428 nucleotides mRNA_4976: 13344 - Hypothetical Protein, at 1,457,549 to 1,458,145 13344 mRNA_4977: 13345 - Hypothetical Protein, at 1,459,156 to 1,464,394 13345 mRNA_4978: 13346 - K12883 NCBP2, CBP20 nuclear cap-binding protein subunit 2, at 1,465,278 to 1,466,176 13346 mRNA_4979: 13347 - K03575 mutY A/G-specific adenine glycosylase, at 1,466,290 to 1,468,594 13347 mRNA_4980: 13348 - K07432 ALG13 beta-1,4-N-acetylglucosaminyltransferase, at 1,469,023 to 1,469,757 13348
Group Condition mRNA_4976 mRNA_4977 mRNA_4978 mRNA_4979 mRNA_4980
13344 13345 13346 13347 13348
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 -1.0 -0.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 -1.3 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.0 -1.4 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.7 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 -0.8 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.3 -0.3 N.D.
growth on ypd YPD +0.0 -0.0 +0.0 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.0 -0.5 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.2 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 -0.0 -0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.3 -0.0 -0.2 -0.3 N.D.
auxotrophy Dropout Complete +0.0 +0.1 -0.2 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 -0.4 -0.1 N.D.
auxotrophy YNB Glucose -0.0 +0.2 +0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.3 -0.4 +0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.4 +0.0 -0.0 N.D.
growth on oleic acid YNB Glucose +0.2 +0.1 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 +0.5 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 +1.2 +0.3 N.D.
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