Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13345 and 13346 are separated by 883 nucleotides13346 and 13347 are separated by 113 nucleotides13347 and 13348 are separated by 428 nucleotides13348 and 13349 are separated by 223 nucleotides mRNA_4977: 13345 - Hypothetical Protein, at 1,459,156 to 1,464,394 13345 mRNA_4978: 13346 - K12883 NCBP2, CBP20 nuclear cap-binding protein subunit 2, at 1,465,278 to 1,466,176 13346 mRNA_4979: 13347 - K03575 mutY A/G-specific adenine glycosylase, at 1,466,290 to 1,468,594 13347 mRNA_4980: 13348 - K07432 ALG13 beta-1,4-N-acetylglucosaminyltransferase, at 1,469,023 to 1,469,757 13348 mRNA_4981: 13349 - KOG2117 Uncharacterized conserved protein, at 1,469,981 to 1,471,275 13349
Group Condition mRNA_4977 mRNA_4978 mRNA_4979 mRNA_4980 mRNA_4981
13345 13346 13347 13348 13349
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -1.0 -0.9 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -1.4 -0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.3 +0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.7 -0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.8 +0.0 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.6 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.5 -0.0 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.0 -0.2 -0.3 N.D. N.D.
growth on ypd YPD -0.0 +0.0 -0.5 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 -0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.4 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 -0.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.0 N.D. N.D.
auxotrophy Dropout Complete +0.1 -0.2 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.4 +0.0 N.D. N.D.
auxotrophy YNB Glucose +0.2 +0.0 -0.2 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.4 +0.0 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.5 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +1.2 +0.3 N.D. N.D.
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