Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13354 and 13355 are separated by 503 nucleotides13355 and 13356 are separated by 507 nucleotides13356 and 13357 are separated by 760 nucleotides13357 and 13358 are separated by 152 nucleotides mRNA_4986: 13354 - K17943 PUM pumilio RNA-binding family, at 1,478,894 to 1,482,308 13354 mRNA_4987: 13355 - Hypothetical Protein, at 1,482,812 to 1,483,516 13355 mRNA_4988: 13356 - KOG1014 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3, at 1,484,024 to 1,484,924 13356 mRNA_4989: 13357 - Hypothetical Protein, at 1,485,685 to 1,486,453 13357 mRNA_4990: 13358 - K00354 E1.6.99.1 NADPH2 dehydrogenase, at 1,486,606 to 1,488,181 13358
Group Condition mRNA_4986 mRNA_4987 mRNA_4988 mRNA_4989 mRNA_4990
13354 13355 13356 13357 13358
growth on ricinoleic acid YNB Glucose -0.9 +0.1 -0.3 +0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.2 -0.9 +0.0 -0.5
auxotrophy Dropout Complete -0.5 -0.1 -0.1 +0.0 -0.0
growth on oleic acid YNB Glucose +0.1 -0.1 -0.3 +0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.1 +0.0 +0.2 -0.3
growth on oleic acid YNB Oleic Acid +0.4 -0.1 -0.8 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 +0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 -0.5 -0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.2 -0.1 +0.5 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.1 -0.2 +0.7 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.3 -0.0 +0.1
growth on ypd YPD +0.3 -0.1 +0.3 -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 +0.0 -0.4 +0.1
auxotrophy YNB Glucose -0.5 +0.1 +0.0 +0.3 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1 +0.4 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 -0.1 -0.3 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.0 -0.1 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 -0.1 +0.1 +0.7
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.0 +0.0 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.1 -0.1 -0.2 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.1 +0.1 -0.3 +0.7
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