Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13359 and 13360 are separated by 955 nucleotides
13360 and 13361 are separated by 197 nucleotides
13361 and 13362 are separated by 293 nucleotides
13362 and 13363 are separated by 202 nucleotides
mRNA_4991: 13359 - Hypothetical Protein, at 1,488,535 to 1,491,302
13359
mRNA_4992: 13360 - Hypothetical Protein, at 1,492,258 to 1,494,685
13360
mRNA_4993: 13361 - K20660 CYP709 cytochrome P450, family 709, at 1,494,883 to 1,497,041
13361
mRNA_4994: 13362 - K09568 FKBP1 FK506-binding protein 1, at 1,497,335 to 1,498,309
13362
mRNA_4995: 13363 - Hypothetical Protein, at 1,498,512 to 1,499,346
13363
Group
Condition
mRNA
_4991
mRNA
_4992
mRNA
_4993
mRNA
_4994
mRNA
_4995
13359
13360
13361
13362
13363
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-1.5
-0.4
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.5
+0.2
+0.0
-1.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.2
-0.2
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.0
-0.1
-0.1
+0.3
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.2
-0.1
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.2
-0.2
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.2
-0.3
+0.3
-0.1
growth on oleic acid
YNB Glucose
+0.2
-0.0
+0.1
+0.1
-0.2
auxotrophy
Dropout Complete
+0.3
+0.4
+0.5
-0.2
-0.6
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
-0.1
+0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.5
-0.2
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.4
+0.3
+0.3
-0.2
auxotrophy
YNB Glucose
+0.3
+0.7
+0.3
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.1
+0.1
+0.5
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+1.1
+0.5
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.8
-0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.1
+0.8
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.4
+0.6
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.5
+0.4
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.5
+0.8
+0.4
-0.0
-0.1
growth on ypd
YPD
+0.8
+1.0
-0.6
+0.3
+0.6
remove
mRNA_4991
plot
remove
mRNA_4992
plot
remove
mRNA_4993
remove
mRNA_4994
plot
remove
mRNA_4995
plot