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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13361 and 13362 are separated by 293 nucleotides
13362 and 13363 are separated by 202 nucleotides
13363 and 13364 are separated by 137 nucleotides
13364 and 13365 are separated by 226 nucleotides
mRNA_4993: 13361 - K20660 CYP709 cytochrome P450, family 709, at 1,494,883 to 1,497,041
13361
mRNA_4994: 13362 - K09568 FKBP1 FK506-binding protein 1, at 1,497,335 to 1,498,309
13362
mRNA_4995: 13363 - Hypothetical Protein, at 1,498,512 to 1,499,346
13363
mRNA_4996: 13364 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1,499,484 to 1,500,162
13364
mRNA_4997: 13365 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 1,500,389 to 1,502,919
13365
Group
Condition
mRNA
_4993
mRNA
_4994
mRNA
_4995
mRNA
_4996
mRNA
_4997
13361
13362
13363
13364
13365
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.0
-1.1
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
-0.1
N.D.
-0.6
growth on oleic acid
YNB Oleic Acid
-0.1
+0.3
-0.6
N.D.
-0.2
auxotrophy
Dropout Complete
+0.5
-0.2
-0.6
N.D.
-0.2
auxotrophy
YNB Glucose
+0.3
+0.1
-0.5
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
+0.0
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.2
-0.1
N.D.
-0.6
growth on oleic acid
YNB Glucose
+0.1
+0.1
-0.2
N.D.
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.0
-0.0
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
-0.1
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.0
-0.1
N.D.
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.3
-0.1
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
+0.0
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
+0.2
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
+0.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
+0.1
-0.2
N.D.
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
+0.1
N.D.
+0.0
growth on ypd
YPD
-0.6
+0.3
+0.6
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.6
+0.1
-0.0
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.3
-0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.5
+0.3
N.D.
+0.2
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