Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 13364 and 13365 are separated by 226 nucleotides13365 and 13366 are separated by 579 nucleotides13366 and 13367 are separated by 367 nucleotides13367 and 13368 are separated by 196 nucleotides mRNA_4996: 13364 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1,499,484 to 1,500,162 13364 mRNA_4997: 13365 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 1,500,389 to 1,502,919 13365 mRNA_4998: 13366 - KOG4169 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases, at 1,503,499 to 1,504,533 13366 mRNA_4999: 13367 - Hypothetical Protein, at 1,504,901 to 1,505,364 13367 mRNA_5000: 13368 - K16302 CNNM metal transporter CNNM, at 1,505,561 to 1,508,084 13368
Group Condition mRNA_4996 mRNA_4997 mRNA_4998 mRNA_4999 mRNA_5000
13364 13365 13366 13367 13368
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 -0.2 N.D. -0.7
growth on oleic acid YNB Glucose N.D. -0.2 -0.1 N.D. -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 -0.0 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.2 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 -0.1 N.D. -0.3
auxotrophy YNB Glucose N.D. -0.3 -0.0 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.2 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.5 -0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.5 -0.2 N.D. +0.2
auxotrophy Dropout Complete N.D. -0.2 -0.1 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.2 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 +0.2 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.2 N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 -0.1 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 -0.0 N.D. -0.2
growth on ypd YPD N.D. +0.1 +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.3 N.D. -0.4
growth on ricinoleic acid YNB Glucose N.D. +0.0 +0.1 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.1 N.D. +0.3
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