Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13369 and 13370 are separated by 1709 nucleotides13370 and 13371 are separated by 614 nucleotides13371 and 13372 are separated by 222 nucleotides13372 and 13373 are separated by 5684 nucleotides mRNA_5001: 13369 - K00649 GNPAT glyceronephosphate O-acyltransferase, at 1,508,431 to 1,511,895 13369 mRNA_5002: 13370 - K02981 RP-S2e, RPS2 small subunit ribosomal protein S2e, at 1,513,605 to 1,514,626 13370 mRNA_5003: 13371 - Hypothetical Protein, at 1,515,241 to 1,515,824 13371 mRNA_5004: 13372 - K12848 SNU23 U4/U6.U5 tri-snRNP component SNU23, at 1,516,047 to 1,517,117 13372 mRNA_5005: 13373 - K10956 SEC61A protein transport protein SEC61 subunit alpha, at 1,522,802 to 1,524,731 13373
Group Condition mRNA_5001 mRNA_5002 mRNA_5003 mRNA_5004 mRNA_5005
13369 13370 13371 13372 13373
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.1 N.D. -1.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. +0.2 N.D. -1.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -0.0 N.D. -0.7
growth on ypd YPD +0.0 N.D. -0.1 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.3 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. +0.2 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.2 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.2 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.3 N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.2 N.D. +0.1
growth on oleic acid YNB Glucose -0.1 N.D. +0.0 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.0 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.0 N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. -0.0 N.D. +0.0
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.3 N.D. +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.3 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.4 N.D. +0.2
auxotrophy YNB Glucose +0.0 N.D. +0.0 N.D. +0.7
auxotrophy Dropout Complete +0.1 N.D. +0.1 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.1 N.D. +0.5
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