Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13371 and 13372 are separated by 222 nucleotides13372 and 13373 are separated by 5684 nucleotides13373 and 13374 are separated by 269 nucleotides13374 and 13375 are separated by 296 nucleotides mRNA_5003: 13371 - Hypothetical Protein, at 1,515,241 to 1,515,824 13371 mRNA_5004: 13372 - K12848 SNU23 U4/U6.U5 tri-snRNP component SNU23, at 1,516,047 to 1,517,117 13372 mRNA_5005: 13373 - K10956 SEC61A protein transport protein SEC61 subunit alpha, at 1,522,802 to 1,524,731 13373 mRNA_5006: 13374 - K20299 VPS53 vacuolar protein sorting-associated protein 53, at 1,525,001 to 1,528,336 13374 mRNA_5007: 13375 - Hypothetical Protein, at 1,528,633 to 1,529,200 13375
Group Condition mRNA_5003 mRNA_5004 mRNA_5005 mRNA_5006 mRNA_5007
13371 13372 13373 13374 13375
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -1.8 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -1.3 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.7 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.2 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. -0.4 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.2 -0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.6 -0.2 +0.2
growth on oleic acid YNB Glucose +0.0 N.D. -0.1 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. +0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.1 -0.1 +0.1
growth on ypd YPD -0.1 N.D. -0.4 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.0 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.0 -0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.2 +0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.6 -0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.4 -0.5 +0.1
auxotrophy Dropout Complete +0.1 N.D. +0.5 +0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.5 +0.0 -0.3
auxotrophy YNB Glucose +0.0 N.D. +0.7 -0.0 -0.3
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.2 +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 N.D. +0.2 +0.1 +0.1
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