Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13372 and 13373 are separated by 5684 nucleotides13373 and 13374 are separated by 269 nucleotides13374 and 13375 are separated by 296 nucleotides13375 and 13376 are separated by 1146 nucleotides mRNA_5004: 13372 - K12848 SNU23 U4/U6.U5 tri-snRNP component SNU23, at 1,516,047 to 1,517,117 13372 mRNA_5005: 13373 - K10956 SEC61A protein transport protein SEC61 subunit alpha, at 1,522,802 to 1,524,731 13373 mRNA_5006: 13374 - K20299 VPS53 vacuolar protein sorting-associated protein 53, at 1,525,001 to 1,528,336 13374 mRNA_5007: 13375 - Hypothetical Protein, at 1,528,633 to 1,529,200 13375 mRNA_5008: 13376 - KOG2319 Vacuolar assembly/sorting protein VPS9, at 1,530,347 to 1,531,248 13376
Group Condition mRNA_5004 mRNA_5005 mRNA_5006 mRNA_5007 mRNA_5008
13372 13373 13374 13375 13376
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.8 -0.1 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.6 -0.2 +0.2 -0.5
growth on oleic acid YNB Glucose N.D. -0.1 -0.0 -0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 -0.2 -0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.6 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.3 -0.0 -0.2 +0.8
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.2 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.7 -0.1 -0.1 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 -0.5 +0.1 -0.2
auxotrophy Dropout Complete N.D. +0.5 +0.1 -0.4 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 +0.0 -0.3 -0.3
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.4 -0.3 -0.5
auxotrophy YNB Glucose N.D. +0.7 -0.0 -0.3 -0.4
growth on ypd YPD N.D. -0.4 +0.1 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.1 -0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.6 -0.0 -0.0 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 +0.0 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.1 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 -0.3 +0.3 +0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 -0.2 +0.2 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.1 +0.1 +0.7
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