Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13373 and 13374 are separated by 269 nucleotides13374 and 13375 are separated by 296 nucleotides13375 and 13376 are separated by 1146 nucleotides13376 and 13377 are separated by 47 nucleotides mRNA_5005: 13373 - K10956 SEC61A protein transport protein SEC61 subunit alpha, at 1,522,802 to 1,524,731 13373 mRNA_5006: 13374 - K20299 VPS53 vacuolar protein sorting-associated protein 53, at 1,525,001 to 1,528,336 13374 mRNA_5007: 13375 - Hypothetical Protein, at 1,528,633 to 1,529,200 13375 mRNA_5008: 13376 - KOG2319 Vacuolar assembly/sorting protein VPS9, at 1,530,347 to 1,531,248 13376 mRNA_5009: 13377 - K07195 EXOC7, EXO70 exocyst complex component 7, at 1,531,296 to 1,533,936 13377
Group Condition mRNA_5005 mRNA_5006 mRNA_5007 mRNA_5008 mRNA_5009
13373 13374 13375 13376 13377
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 -0.1 +0.1 -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.6 -0.2 +0.2 -0.5 -0.1
growth on oleic acid YNB Glucose -0.1 -0.0 -0.3 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.3 -0.0 -0.2 +0.8 -0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.2 -0.4 -0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 -0.1 -0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 -0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 -0.1 +0.7 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.5 +0.1 -0.2 -0.1
auxotrophy YNB Glucose +0.7 -0.0 -0.3 -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.0 -0.3 -0.3 -0.1
growth on ypd YPD -0.4 +0.1 +0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 -0.1 +0.3 -0.2
auxotrophy Dropout Complete +0.5 +0.1 -0.4 -0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.0 -0.0 -0.5 -0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.4 -0.3 -0.5 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.0 +0.1 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.1 -0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.3 +0.3 +0.6 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 +0.2 +0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 +0.1 +0.7 +0.1
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