Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13374 and 13375 are separated by 296 nucleotides13375 and 13376 are separated by 1146 nucleotides13376 and 13377 are separated by 47 nucleotides13377 and 13378 are separated by 506 nucleotides mRNA_5006: 13374 - K20299 VPS53 vacuolar protein sorting-associated protein 53, at 1,525,001 to 1,528,336 13374 mRNA_5007: 13375 - Hypothetical Protein, at 1,528,633 to 1,529,200 13375 mRNA_5008: 13376 - KOG2319 Vacuolar assembly/sorting protein VPS9, at 1,530,347 to 1,531,248 13376 mRNA_5009: 13377 - K07195 EXOC7, EXO70 exocyst complex component 7, at 1,531,296 to 1,533,936 13377 mRNA_5010: 13378 - K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37, at 1,534,443 to 1,540,178 13378
Group Condition mRNA_5006 mRNA_5007 mRNA_5008 mRNA_5009 mRNA_5010
13374 13375 13376 13377 13378
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.1 -0.3 -0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.1 -0.2 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.2 -0.5 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -0.5 +0.1 +0.0
growth on ricinoleic acid YNB Glucose -0.2 -0.4 -0.3 -0.0 +0.5
auxotrophy YNB Glucose -0.0 -0.3 -0.4 -0.2 +0.6
auxotrophy Dropout Complete +0.1 -0.4 -0.5 +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.3 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 -0.5 -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.3 -0.3 -0.1 +0.5
growth on oleic acid YNB Glucose -0.0 -0.3 -0.4 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 +0.7 -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 +0.2 +0.1 +0.5
growth on oleic acid YNB Oleic Acid +0.4 -0.3 -0.5 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +0.3 -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.1 -0.1 -0.1 +0.4
growth on ypd YPD +0.1 +0.3 -0.1 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 +0.8 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 +0.7 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 +0.7 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.3 +0.6 +0.1 +0.3
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