Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 13376 and 13377 are separated by 47 nucleotides13377 and 13378 are separated by 506 nucleotides13378 and 13379 are separated by 171 nucleotides13379 and 13380 are separated by 218 nucleotides mRNA_5008: 13376 - KOG2319 Vacuolar assembly/sorting protein VPS9, at 1,530,347 to 1,531,248 13376 mRNA_5009: 13377 - K07195 EXOC7, EXO70 exocyst complex component 7, at 1,531,296 to 1,533,936 13377 mRNA_5010: 13378 - K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37, at 1,534,443 to 1,540,178 13378 mRNA_5011: 13379 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,540,350 to 1,542,527 13379 mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1,542,746 to 1,545,688 13380
Group Condition mRNA_5008 mRNA_5009 mRNA_5010 mRNA_5011 mRNA_5012
13376 13377 13378 13379 13380
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 -0.2 -1.1 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 +0.4 -0.9 -1.0
growth on ricinoleic acid YNB Glucose -0.3 -0.0 +0.5 -0.5 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4 -0.4 +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 +0.5 -0.4 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.6 +0.1 +0.3 -0.0 -1.8
growth on ypd YPD -0.1 -0.2 +0.2 -0.1 -0.8
growth on oleic acid YNB Oleic Acid -0.5 +0.1 +0.4 -0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.1 -0.1 +0.1 +0.1
auxotrophy Dropout Complete -0.5 +0.1 +0.4 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 -0.1 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 +0.5 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.2 +0.1 -0.6 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.1 +0.0 -0.1 +0.4
auxotrophy YNB Glucose -0.4 -0.2 +0.6 -0.2 +0.1
growth on oleic acid YNB Glucose -0.4 +0.1 +0.5 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.2 -0.3 -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 +0.5 +0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.7 -0.1 +0.2 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 -0.0 -0.2 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.1 -0.3 -0.0 +0.6
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