Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13377 and 13378 are separated by 506 nucleotides
13378 and 13379 are separated by 171 nucleotides
13379 and 13380 are separated by 218 nucleotides
13380 and 13381 are separated by 232 nucleotides
mRNA_5009: 13377 - K07195 EXOC7, EXO70 exocyst complex component 7, at 1,531,296 to 1,533,936
13377
mRNA_5010: 13378 - K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37, at 1,534,443 to 1,540,178
13378
mRNA_5011: 13379 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,540,350 to 1,542,527
13379
mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1,542,746 to 1,545,688
13380
mRNA_5013: 13381 - BLAST regulatory protein wetA [Paracoccidioides lutzii ..., at 1,545,921 to 1,548,060
13381
Group
Condition
mRNA
_5009
mRNA
_5010
mRNA
_5011
mRNA
_5012
mRNA
_5013
13377
13378
13379
13380
13381
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
-1.1
-0.9
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.3
-0.0
-1.8
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.4
-0.9
-1.0
+0.4
growth on ypd
YPD
-0.2
+0.2
-0.1
-0.8
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
+0.5
-0.5
-0.9
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.4
+0.2
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.1
-0.6
+0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
-0.0
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.3
-0.1
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.5
-0.4
-0.4
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.1
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.4
-0.4
-0.3
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
+0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.3
-0.0
+0.6
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
-0.3
+0.6
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.0
-0.1
+0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.5
+0.2
-0.6
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.5
-0.4
+0.2
+0.5
growth on oleic acid
YNB Glucose
+0.1
+0.5
-0.2
+0.1
+0.2
auxotrophy
Dropout Complete
+0.1
+0.4
-0.2
-0.1
+0.5
auxotrophy
YNB Glucose
-0.2
+0.6
-0.2
+0.1
+0.7
remove
mRNA_5009
plot
remove
mRNA_5010
plot
remove
mRNA_5011
remove
mRNA_5012
plot
remove
mRNA_5013
plot