Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 13377 and 13378 are separated by 506 nucleotides13378 and 13379 are separated by 171 nucleotides13379 and 13380 are separated by 218 nucleotides13380 and 13381 are separated by 232 nucleotides mRNA_5009: 13377 - K07195 EXOC7, EXO70 exocyst complex component 7, at 1,531,296 to 1,533,936 13377 mRNA_5010: 13378 - K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37, at 1,534,443 to 1,540,178 13378 mRNA_5011: 13379 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,540,350 to 1,542,527 13379 mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1,542,746 to 1,545,688 13380 mRNA_5013: 13381 - BLAST regulatory protein wetA [Paracoccidioides lutzii ..., at 1,545,921 to 1,548,060 13381
Group Condition mRNA_5009 mRNA_5010 mRNA_5011 mRNA_5012 mRNA_5013
13377 13378 13379 13380 13381
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 -1.1 -0.9 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 -0.0 -1.8 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.4 -0.9 -1.0 +0.4
growth on ypd YPD -0.2 +0.2 -0.1 -0.8 -0.2
growth on ricinoleic acid YNB Glucose -0.0 +0.5 -0.5 -0.9 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 +0.2 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 -0.6 +0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 -0.0 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3 -0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.5 -0.4 -0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.1 +0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.4 -0.4 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 -0.0 +0.6 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 -0.3 +0.6 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 -0.1 +0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.5 +0.2 -0.6 +0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.5 -0.4 +0.2 +0.5
growth on oleic acid YNB Glucose +0.1 +0.5 -0.2 +0.1 +0.2
auxotrophy Dropout Complete +0.1 +0.4 -0.2 -0.1 +0.5
auxotrophy YNB Glucose -0.2 +0.6 -0.2 +0.1 +0.7
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