Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13379 and 13380 are separated by 218 nucleotides13380 and 13381 are separated by 232 nucleotides13381 and 13382 are separated by 1189 nucleotides13382 and 13383 are separated by 480 nucleotides mRNA_5011: 13379 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1,540,350 to 1,542,527 13379 mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1,542,746 to 1,545,688 13380 mRNA_5013: 13381 - BLAST regulatory protein wetA [Paracoccidioides lutzii ..., at 1,545,921 to 1,548,060 13381 mRNA_5014: 13382 - K01621 xfp, xpk xylulose-5-phosphate/fructose-6-phosphate phosphoketolase, at 1,549,250 to 1,553,078 13382 mRNA_5015: 13383 - K00925 ackA acetate kinase, at 1,553,559 to 1,555,008 13383
Group Condition mRNA_5011 mRNA_5012 mRNA_5013 mRNA_5014 mRNA_5015
13379 13380 13381 13382 13383
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 -0.9 +0.2 -0.3 +0.0
growth on ricinoleic acid YNB Glucose -0.5 -0.9 +0.1 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -1.0 +0.4 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -1.8 +0.1 +0.0 +0.2
growth on ypd YPD -0.1 -0.8 -0.2 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.4 +0.3 -0.2 -0.4
auxotrophy Dropout Complete -0.2 -0.1 +0.5 -0.4 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 -0.4 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.2 -0.3 +0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.4 -0.3 +0.2 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.1 +0.1 -0.5
auxotrophy YNB Glucose -0.2 +0.1 +0.7 -0.4 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.2 +0.5 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 +0.0 +0.6 -0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.1 +0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.6 +0.5 -0.3 +0.3
growth on oleic acid YNB Glucose -0.2 +0.1 +0.2 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.4 +0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.6 +0.5 -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.1 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.6 +0.0 +0.2 -0.2
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