Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13380 and 13381 are separated by 232 nucleotides13381 and 13382 are separated by 1189 nucleotides13382 and 13383 are separated by 480 nucleotides13383 and 13384 are separated by 718 nucleotides mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1,542,746 to 1,545,688 13380 mRNA_5013: 13381 - BLAST regulatory protein wetA [Paracoccidioides lutzii ..., at 1,545,921 to 1,548,060 13381 mRNA_5014: 13382 - K01621 xfp, xpk xylulose-5-phosphate/fructose-6-phosphate phosphoketolase, at 1,549,250 to 1,553,078 13382 mRNA_5015: 13383 - K00925 ackA acetate kinase, at 1,553,559 to 1,555,008 13383 mRNA_5016: 13384 - BLAST UPF0643 protein PB2B2.08 [Hypsizygus marmoreus], at 1,555,727 to 1,556,735 13384
Group Condition mRNA_5012 mRNA_5013 mRNA_5014 mRNA_5015 mRNA_5016
13380 13381 13382 13383 13384
facs on lipid accumulation Sorted No BODIPY Gate -1.8 +0.1 +0.0 +0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.9 +0.1 -0.4 -0.2 -0.0
growth on ypd YPD -0.8 -0.2 +0.1 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 +0.4 -0.2 -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 +0.2 -0.3 +0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.4 +0.1 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.3 -0.2 -0.4 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.0 +0.6 -0.6 -0.2
auxotrophy Dropout Complete -0.1 +0.5 -0.4 -0.5 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.3 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.5 -0.3 +0.3 +0.1
auxotrophy YNB Glucose +0.1 +0.7 -0.4 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 +0.1 -0.5 +0.4
growth on oleic acid YNB Glucose +0.1 +0.2 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.4 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 +0.1 -0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.3 +0.2 -0.2 +0.2 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.5 -0.3 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 +0.2 -0.1 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.5 -0.1 -0.4 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.0 +0.2 -0.2 +0.8
remove
mRNA_5012
plot
remove
mRNA_5013
plot
remove
mRNA_5014
remove
mRNA_5015
plot
remove
mRNA_5016
plot