Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13384 and 13385 are separated by 271 nucleotides
13385 and 13386 are separated by 157 nucleotides
13386 and 13387 are separated by 70 nucleotides
13387 and 13388 are separated by 326 nucleotides
mRNA_5016: 13384 - BLAST UPF0643 protein PB2B2.08 [Hypsizygus marmoreus], at 1,555,727 to 1,556,735
13384
mRNA_5017: 13385 - K08963 mtnA methylthioribose-1-phosphate isomerase, at 1,557,007 to 1,558,590
13385
mRNA_5018: 13386 - Hypothetical Protein, at 1,558,748 to 1,560,542
13386
mRNA_5019: 13387 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,560,613 to 1,563,320
13387
mRNA_5020: 13388 - K20178 VPS8 vacuolar protein sorting-associated protein 8, at 1,563,647 to 1,569,301
13388
Group
Condition
mRNA
_5016
mRNA
_5017
mRNA
_5018
mRNA
_5019
mRNA
_5020
13384
13385
13386
13387
13388
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-1.5
-0.2
-0.3
-1.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-1.4
-0.1
-0.3
-1.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.7
-0.1
-0.3
-1.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.9
-0.2
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.7
-0.1
+0.2
-0.8
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.0
-0.2
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-1.1
-0.2
-0.2
+0.8
auxotrophy
YNB Glucose
+0.1
-0.3
-0.2
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.7
-0.0
-0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.1
+0.3
+0.3
-0.7
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
+0.1
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.8
-0.7
-0.3
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
+0.0
-0.0
auxotrophy
Dropout Complete
+0.1
+0.3
-0.3
+0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
+0.0
+0.0
+0.0
growth on ricinoleic acid
YNB Glucose
-0.0
-0.3
-0.3
-0.0
+1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.1
-0.1
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
-0.8
-0.2
-0.3
+1.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.2
-0.2
+0.2
-0.1
growth on oleic acid
YNB Oleic Acid
+0.5
+0.5
+0.3
+0.0
-0.9
growth on ypd
YPD
+0.0
+1.4
+0.0
-0.1
+0.3
remove
mRNA_5016
plot
remove
mRNA_5017
plot
remove
mRNA_5018
remove
mRNA_5019
plot
remove
mRNA_5020
plot