Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13387 and 13388 are separated by 326 nucleotides13388 and 13389 are separated by 190 nucleotides13389 and 13390 are separated by 241 nucleotides13390 and 13391 are separated by 240 nucleotides mRNA_5019: 13387 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,560,613 to 1,563,320 13387 mRNA_5020: 13388 - K20178 VPS8 vacuolar protein sorting-associated protein 8, at 1,563,647 to 1,569,301 13388 mRNA_5021: 13389 - K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7, at 1,569,492 to 1,571,260 13389 mRNA_5022: 13390 - Hypothetical Protein, at 1,571,502 to 1,572,574 13390 mRNA_5023: 13391 - K17866 DPH2 diphthamide biosynthesis protein 2, at 1,572,815 to 1,575,164 13391
Group Condition mRNA_5019 mRNA_5020 mRNA_5021 mRNA_5022 mRNA_5023
13387 13388 13389 13390 13391
growth on oleic acid YNB Glucose -0.2 -0.5 -0.0 -0.6 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.4 -0.3 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -1.4 +0.3 +0.6 -0.7
growth on oleic acid YNB Oleic Acid +0.0 -0.9 +0.1 -0.2 -0.4
auxotrophy YNB Glucose +0.2 -0.3 +0.2 -0.4 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.3 +0.5 +0.0 -1.4
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.8 +0.4 -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 -0.0 -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.7 -0.5 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -1.2 +0.8 +0.3 -0.2
auxotrophy Dropout Complete +0.0 -0.1 +0.0 -0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 -0.1 -0.2 -0.4
growth on ypd YPD -0.1 +0.3 +0.0 -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.1 -0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 +0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.1 +0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.4 +0.5 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +1.0 +0.0 -0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.0 +1.0 +0.4 -0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.8 +0.5 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 +0.1 +0.9 +0.1
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