Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13390 and 13391 are separated by 240 nucleotides13391 and 13392 are separated by 491 nucleotides13392 and 13393 are separated by 433 nucleotides13393 and 13394 are separated by 186 nucleotides mRNA_5022: 13390 - Hypothetical Protein, at 1,571,502 to 1,572,574 13390 mRNA_5023: 13391 - K17866 DPH2 diphthamide biosynthesis protein 2, at 1,572,815 to 1,575,164 13391 mRNA_5024: 13392 - K11124 SMG6, EST1A protein SMG6, at 1,575,656 to 1,580,280 13392 mRNA_5025: 13393 - BLAST HECT-type ubiquitin ligase-interacting protein creD [..., at 1,580,714 to 1,583,108 13393 mRNA_5026: 13394 - K01698 hemB, ALAD porphobilinogen synthase, at 1,583,295 to 1,584,679 13394
Group Condition mRNA_5022 mRNA_5023 mRNA_5024 mRNA_5025 mRNA_5026
13390 13391 13392 13393 13394
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.3 -2.3 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -1.4 +0.5 -0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.3 -0.3 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 -1.1 +0.3 N.D.
auxotrophy YNB Glucose -0.4 -0.8 +0.3 -0.2 N.D.
growth on ypd YPD -0.5 -0.1 -0.7 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.4 +0.1 -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 +0.4 -0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.0 -0.6 -0.1 N.D.
growth on oleic acid YNB Glucose -0.6 -0.3 +0.3 +0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.3 -0.5 +0.7 -0.5 N.D.
auxotrophy Dropout Complete -0.5 -0.0 +0.4 -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.4 +0.6 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 +0.4 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.1 +0.5 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.2 -0.2 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.7 +0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 +0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.5 +0.9 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.9 +0.1 +0.3 -0.2 N.D.
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