Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13392 and 13393 are separated by 433 nucleotides13393 and 13394 are separated by 186 nucleotides13394 and 13395 are separated by 544 nucleotides13395 and 13396 are separated by 1103 nucleotides mRNA_5024: 13392 - K11124 SMG6, EST1A protein SMG6, at 1,575,656 to 1,580,280 13392 mRNA_5025: 13393 - BLAST HECT-type ubiquitin ligase-interacting protein creD [..., at 1,580,714 to 1,583,108 13393 mRNA_5026: 13394 - K01698 hemB, ALAD porphobilinogen synthase, at 1,583,295 to 1,584,679 13394 mRNA_5027: 13395 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1,585,224 to 1,587,309 13395 mRNA_5028: 13396 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1,588,413 to 1,590,373 13396
Group Condition mRNA_5024 mRNA_5025 mRNA_5026 mRNA_5027 mRNA_5028
13392 13393 13394 13395 13396
ypd buoyancy 40 hrs No Buoyancy Separation -2.3 -0.3 N.D. -0.8 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.3 N.D. -0.8 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 N.D. -1.0 -0.1
auxotrophy Dropout Complete +0.4 -0.3 N.D. -0.8 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 N.D. -0.3 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 N.D. -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.4 N.D. -0.6 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 N.D. -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.6 -0.1 N.D. +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 N.D. -0.1 -0.0
growth on ypd YPD -0.7 +0.2 N.D. +0.7 -0.3
auxotrophy YNB Glucose +0.3 -0.2 N.D. -0.5 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.4 N.D. +0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.6 -0.2 N.D. -0.5 +0.1
growth on oleic acid YNB Glucose +0.3 +0.0 N.D. +0.2 -0.4
growth on ricinoleic acid YNB Glucose +0.7 -0.5 N.D. -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.2 N.D. -0.5 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 -0.5 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.1 N.D. +0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.6 N.D. +0.1 +0.5
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