Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13393 and 13394 are separated by 186 nucleotides13394 and 13395 are separated by 544 nucleotides13395 and 13396 are separated by 1103 nucleotides13396 and 13397 are separated by 683 nucleotides mRNA_5025: 13393 - BLAST HECT-type ubiquitin ligase-interacting protein creD [..., at 1,580,714 to 1,583,108 13393 mRNA_5026: 13394 - K01698 hemB, ALAD porphobilinogen synthase, at 1,583,295 to 1,584,679 13394 mRNA_5027: 13395 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1,585,224 to 1,587,309 13395 mRNA_5028: 13396 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1,588,413 to 1,590,373 13396 mRNA_5029: 13397 - HMMPfam-Ornithine decarboxylase antizyme-PF02100,SUPERFAMILY--SSF55729, at 1,591,057 to 1,592,630 13397
Group Condition mRNA_5025 mRNA_5026 mRNA_5027 mRNA_5028 mRNA_5029
13393 13394 13395 13396 13397
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.8 -0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -1.0 -0.1 +0.1
auxotrophy Dropout Complete -0.3 N.D. -0.8 +0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.5 N.D. -0.2 +0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.5 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.3 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.0 -0.4 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. -0.6 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. -0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.3 +0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.8 +0.1 +0.1
auxotrophy YNB Glucose -0.2 N.D. -0.5 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.1 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.5 +0.4 +0.1
growth on oleic acid YNB Glucose +0.0 N.D. +0.2 -0.4 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.4 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. +0.3 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. +0.1 +0.5 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.3 +0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.2 +0.3 +0.2
growth on ypd YPD +0.2 N.D. +0.7 -0.3 -0.1
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