Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13401 and 13402 are separated by 957 nucleotides13402 and 13403 are separated by 522 nucleotides13403 and 13404 are separated by 206 nucleotides13404 and 13405 are separated by 387 nucleotides mRNA_5033: 13401 - KOG4436 Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains), at 1,601,468 to 1,605,781 13401 mRNA_5034: 13402 - KOG4589 Cell division protein FtsJ, at 1,606,739 to 1,607,440 13402 mRNA_5035: 13403 - K11304 TIP60, KAT5, ESA1 histone acetyltransferase HTATIP, at 1,607,963 to 1,609,879 13403 mRNA_5036: 13404 - Hypothetical Protein, at 1,610,086 to 1,610,551 13404 mRNA_5037: 13405 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1,610,939 to 1,612,058 13405
Group Condition mRNA_5033 mRNA_5034 mRNA_5035 mRNA_5036 mRNA_5037
13401 13402 13403 13404 13405
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.7 N.D. -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 N.D. -0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.5 +0.5 N.D. -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 N.D. -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.3 N.D. -0.4 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.4 N.D. -0.2 +0.2
auxotrophy Dropout Complete -0.0 +0.2 N.D. +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 N.D. +0.1 -0.1
auxotrophy YNB Glucose -0.0 +0.5 N.D. -0.1 -0.5
growth on oleic acid YNB Oleic Acid -0.1 +0.2 N.D. -0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.2 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 N.D. -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 N.D. +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 N.D. -0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 N.D. -0.1 +0.3
growth on oleic acid YNB Glucose -0.3 +0.6 N.D. -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 N.D. -0.2 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.6 N.D. -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 N.D. -0.1 +0.2
growth on ypd YPD +0.1 +0.6 N.D. +0.2 +0.1
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