Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13403 and 13404 are separated by 206 nucleotides
13404 and 13405 are separated by 387 nucleotides
13405 and 13406 are separated by 983 nucleotides
13406 and 13407 are separated by 762 nucleotides
mRNA_5035: 13403 - K11304 TIP60, KAT5, ESA1 histone acetyltransferase HTATIP, at 1,607,963 to 1,609,879
13403
mRNA_5036: 13404 - Hypothetical Protein, at 1,610,086 to 1,610,551
13404
mRNA_5037: 13405 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1,610,939 to 1,612,058
13405
mRNA_5038: 13406 - Hypothetical Protein, at 1,613,042 to 1,613,500
13406
mRNA_5039: 13407 - Hypothetical Protein, at 1,614,263 to 1,614,994
13407
Group
Condition
mRNA
_5035
mRNA
_5036
mRNA
_5037
mRNA
_5038
mRNA
_5039
13403
13404
13405
13406
13407
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
+0.2
-2.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.4
+0.0
-1.0
-1.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
-0.1
-1.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.2
-1.5
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.1
-1.2
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.4
-0.7
-0.3
auxotrophy
Dropout Complete
N.D.
+0.1
-0.3
-0.7
-0.2
auxotrophy
YNB Glucose
N.D.
-0.1
-0.5
-0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
+0.2
-1.0
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.2
+0.2
-0.7
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
+0.1
-1.0
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+0.0
-0.7
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.0
-0.5
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
-0.2
-0.7
+0.7
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
+0.3
+0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
+0.3
-0.0
+0.0
growth on ypd
YPD
N.D.
+0.2
+0.1
-0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
+0.3
+0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
+0.2
+0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
+0.6
+0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
+0.3
+0.6
+0.6
remove
mRNA_5035
plot
remove
mRNA_5036
plot
remove
mRNA_5037
remove
mRNA_5038
plot
remove
mRNA_5039
plot