Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13404 and 13405 are separated by 387 nucleotides13405 and 13406 are separated by 983 nucleotides13406 and 13407 are separated by 762 nucleotides13407 and 13408 are separated by 91 nucleotides mRNA_5036: 13404 - Hypothetical Protein, at 1,610,086 to 1,610,551 13404 mRNA_5037: 13405 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1,610,939 to 1,612,058 13405 mRNA_5038: 13406 - Hypothetical Protein, at 1,613,042 to 1,613,500 13406 mRNA_5039: 13407 - Hypothetical Protein, at 1,614,263 to 1,614,994 13407 mRNA_5040: 13408 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1,615,086 to 1,617,129 13408
Group Condition mRNA_5036 mRNA_5037 mRNA_5038 mRNA_5039 mRNA_5040
13404 13405 13406 13407 13408
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 -2.3 -0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.0 -1.0 -1.0 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 -1.0 -0.4 -0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.4 -0.7 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 -1.5 -0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -1.2 -0.3 +0.1
auxotrophy Dropout Complete +0.1 -0.3 -0.7 -0.2 +0.1
auxotrophy YNB Glucose -0.1 -0.5 -0.1 -0.5 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 -1.0 -0.1 +0.2
growth on oleic acid YNB Glucose -0.2 +0.2 -0.7 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 -1.0 +0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.3 -0.0 +0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.4 +0.3 +0.4 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.0 -0.7 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.5 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 -0.7 +0.7 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 +0.2 +0.2 -0.1
growth on ypd YPD +0.2 +0.1 -0.1 +0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.3 +0.0 +0.3 +0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.6 +0.2 +0.1 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 +0.6 +0.6 +0.7
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