Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13406 and 13407 are separated by 762 nucleotides13407 and 13408 are separated by 91 nucleotides13408 and 13409 are separated by 246 nucleotides13409 and 13410 are separated by 186 nucleotides mRNA_5038: 13406 - Hypothetical Protein, at 1,613,042 to 1,613,500 13406 mRNA_5039: 13407 - Hypothetical Protein, at 1,614,263 to 1,614,994 13407 mRNA_5040: 13408 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1,615,086 to 1,617,129 13408 mRNA_5041: 13409 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 1,617,376 to 1,619,999 13409 mRNA_5042: 13410 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1,620,186 to 1,624,463 13410
Group Condition mRNA_5038 mRNA_5039 mRNA_5040 mRNA_5041 mRNA_5042
13406 13407 13408 13409 13410
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -1.0 +0.4 -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -2.3 -0.1 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -1.5 -0.3 +0.2 -0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.7 -0.3 -0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -1.2 -0.3 +0.1 +0.1 +0.4
growth on oleic acid YNB Glucose -0.7 -0.3 +0.2 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -1.0 -0.4 -0.0 +0.2 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.1 +0.2 +0.1 +0.1
auxotrophy Dropout Complete -0.7 -0.2 +0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 +0.4 +0.3 +0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.0 -0.1 +0.1 -0.2
growth on oleic acid YNB Oleic Acid +0.4 -0.3 -0.0 +0.1 -0.1
auxotrophy YNB Glucose -0.1 -0.5 +0.2 +0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 -0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.7 +0.4 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.4 +0.3 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 +0.5 +0.2 +0.2 +0.1
growth on ypd YPD -0.1 +0.2 +0.4 +0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.7 +0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.3 +0.9 +0.3 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.6 +0.7 +0.4 -0.4
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