Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13407 and 13408 are separated by 91 nucleotides13408 and 13409 are separated by 246 nucleotides13409 and 13410 are separated by 186 nucleotides13410 and 13411 are separated by 334 nucleotides mRNA_5039: 13407 - Hypothetical Protein, at 1,614,263 to 1,614,994 13407 mRNA_5040: 13408 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1,615,086 to 1,617,129 13408 mRNA_5041: 13409 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 1,617,376 to 1,619,999 13409 mRNA_5042: 13410 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1,620,186 to 1,624,463 13410 mRNA_5043: 13411 - PIRSF--PIRSF022976, at 1,624,798 to 1,625,839 13411
Group Condition mRNA_5039 mRNA_5040 mRNA_5041 mRNA_5042 mRNA_5043
13407 13408 13409 13410 13411
growth on ricinoleic acid YNB Glucose -0.3 -0.2 -0.1 -0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.4 -0.1 -0.6 +0.3
growth on oleic acid YNB Glucose -0.3 +0.2 -0.1 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 +0.1 +0.1 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 +0.1 +0.1 -0.6
growth on oleic acid YNB Oleic Acid -0.3 -0.0 +0.1 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.2 -0.0 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.1 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 +0.1 -0.1 -0.0
auxotrophy Dropout Complete -0.2 +0.1 +0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.3 +0.0 +0.1 -0.5
auxotrophy YNB Glucose -0.5 +0.2 +0.3 +0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 +0.1 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.3 +0.2 -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 +0.2 +0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.7 +0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.2 +0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.4 +0.1 -0.2 +0.1
growth on ypd YPD +0.2 +0.4 +0.3 -0.0 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.9 +0.3 -0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.7 +0.4 -0.4 +0.2
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