Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13408 and 13409 are separated by 246 nucleotides13409 and 13410 are separated by 186 nucleotides13410 and 13411 are separated by 334 nucleotides13411 and 13412 are separated by 345 nucleotides mRNA_5040: 13408 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1,615,086 to 1,617,129 13408 mRNA_5041: 13409 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 1,617,376 to 1,619,999 13409 mRNA_5042: 13410 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 1,620,186 to 1,624,463 13410 mRNA_5043: 13411 - PIRSF--PIRSF022976, at 1,624,798 to 1,625,839 13411 mRNA_5044: 13412 - K04717 SGPP2 sphingosine-1-phosphate phosphotase 2, at 1,626,185 to 1,628,118 13412
Group Condition mRNA_5040 mRNA_5041 mRNA_5042 mRNA_5043 mRNA_5044
13408 13409 13410 13411 13412
growth on ricinoleic acid YNB Glucose -0.2 -0.1 -0.0 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 +0.1 -0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.1 -0.6 +0.3 -0.3
growth on oleic acid YNB Glucose +0.2 -0.1 -0.1 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.2 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.0 +0.1 -0.5 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 +0.1 -0.7 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.1 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.2 -0.2 -0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.4 -0.4 +0.2 -0.8
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 -0.1 +0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.0 +0.1 -0.1 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.7 +0.2 -0.2 -0.0 -0.2
auxotrophy Dropout Complete +0.1 +0.1 +0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 +0.1 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.1 -0.2 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.2 +0.5 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 +0.4 +0.1 +0.0
auxotrophy YNB Glucose +0.2 +0.3 +0.3 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.9 +0.3 -0.4 +0.2 -0.0
growth on ypd YPD +0.4 +0.3 -0.0 +0.4 -0.1
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