Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13411 and 13412 are separated by 345 nucleotides13412 and 13413 are separated by 435 nucleotides13413 and 13414 are separated by 566 nucleotides13414 and 13415 are separated by 423 nucleotides mRNA_5043: 13411 - PIRSF--PIRSF022976, at 1,624,798 to 1,625,839 13411 mRNA_5044: 13412 - K04717 SGPP2 sphingosine-1-phosphate phosphotase 2, at 1,626,185 to 1,628,118 13412 mRNA_5045: 13413 - K01111 E3.1.3.68 2-deoxyglucose-6-phosphatase, at 1,628,554 to 1,629,804 13413 mRNA_5046: 13414 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1,630,371 to 1,631,224 13414 mRNA_5047: 13415 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1,631,648 to 1,632,435 13415
Group Condition mRNA_5043 mRNA_5044 mRNA_5045 mRNA_5046 mRNA_5047
13411 13412 13413 13414 13415
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.3 +0.1 +0.3 -1.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.0 +0.3 -0.6 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 +0.4 -0.3 -0.6
growth on oleic acid YNB Glucose -0.3 +0.2 -0.2 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.8 +0.1 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 -0.1 -0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 -0.2 +0.0 -0.3
auxotrophy YNB Glucose +0.0 -0.1 +0.7 -0.6 -0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.2 -0.5 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.4 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.0 +0.6 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.0 +0.1 -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 -0.1 +0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.2 +0.7 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 +0.3 -0.2 +0.3
auxotrophy Dropout Complete -0.1 +0.2 +0.6 +0.1 -0.5
growth on ricinoleic acid YNB Glucose -0.4 -0.1 +0.9 -0.6 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.5 -0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +0.3 +0.6 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.2 -0.0 +0.2
growth on ypd YPD +0.4 -0.1 +0.7 +0.3 +0.1
remove
mRNA_5043
plot
remove
mRNA_5044
plot
remove
mRNA_5045
remove
mRNA_5046
plot
remove
mRNA_5047
plot