Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13412 and 13413 are separated by 435 nucleotides
13413 and 13414 are separated by 566 nucleotides
13414 and 13415 are separated by 423 nucleotides
13415 and 13416 are separated by 339 nucleotides
mRNA_5044: 13412 - K04717 SGPP2 sphingosine-1-phosphate phosphotase 2, at 1,626,185 to 1,628,118
13412
mRNA_5045: 13413 - K01111 E3.1.3.68 2-deoxyglucose-6-phosphatase, at 1,628,554 to 1,629,804
13413
mRNA_5046: 13414 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1,630,371 to 1,631,224
13414
mRNA_5047: 13415 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1,631,648 to 1,632,435
13415
mRNA_5048: 13416 - HMMPfam-Animal haem peroxidase-PF03098,ProSiteProfiles-Animal heme peroxidase superfamily profile.-PS50292,SUPERFAMILY--SSF48113, at 1,632,775 to 1,633,418
13416
Group
Condition
mRNA
_5044
mRNA
_5045
mRNA
_5046
mRNA
_5047
mRNA
_5048
13412
13413
13414
13415
13416
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.4
-0.3
-0.6
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.1
+0.3
-1.7
+0.6
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
+0.0
-0.0
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.1
-0.3
-0.4
+0.2
auxotrophy
YNB Glucose
-0.1
+0.7
-0.6
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.1
-0.1
+0.2
-0.5
growth on oleic acid
YNB Glucose
+0.2
-0.2
-0.3
-0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
+0.1
-0.1
-0.1
+0.6
growth on oleic acid
YNB Oleic Acid
+0.2
-0.5
-0.0
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.3
-0.6
-0.0
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
+0.0
-0.3
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.6
-0.4
-0.3
+0.1
auxotrophy
Dropout Complete
+0.2
+0.6
+0.1
-0.5
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.4
+0.1
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
-0.0
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.5
-0.2
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
-0.2
+0.3
+0.3
growth on ypd
YPD
-0.1
+0.7
+0.3
+0.1
+0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.7
-0.2
+0.5
+1.2
growth on ricinoleic acid
YNB Glucose
-0.1
+0.9
-0.6
+0.6
+1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.6
-0.1
+0.4
+1.5
remove
mRNA_5044
plot
remove
mRNA_5045
plot
remove
mRNA_5046
remove
mRNA_5047
plot
remove
mRNA_5048
plot