Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13415 and 13416 are separated by 339 nucleotides13416 and 13417 are separated by 192 nucleotides13417 and 13418 are separated by 246 nucleotides13418 and 13419 are separated by 259 nucleotides mRNA_5047: 13415 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1,631,648 to 1,632,435 13415 mRNA_5048: 13416 - HMMPfam-Animal haem peroxidase-PF03098,ProSiteProfiles-Animal heme peroxidase superfamily profile.-PS50292,SUPERFAMILY--SSF48113, at 1,632,775 to 1,633,418 13416 mRNA_5049: 13417 - HMMPfam-Cytochrome P450-PF00067,SUPERFAMILY--SSF48264, at 1,633,611 to 1,634,725 13417 mRNA_5050: 13418 - Hypothetical Protein, at 1,634,972 to 1,635,708 13418 mRNA_5051: 13419 - KOG1382 Multiple inositol polyphosphate phosphatase, at 1,635,968 to 1,637,866 13419
Group Condition mRNA_5047 mRNA_5048 mRNA_5049 mRNA_5050 mRNA_5051
13415 13416 13417 13418 13419
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 +0.6 N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.5 N.D. -0.3 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.4 N.D. +0.1 +0.1
auxotrophy Dropout Complete -0.5 -0.3 N.D. -0.2 +0.1
growth on oleic acid YNB Glucose -0.1 +0.1 N.D. -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 N.D. -0.1 -0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.0 N.D. -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 N.D. -0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.7 N.D. +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 N.D. -0.1 +0.3
auxotrophy YNB Glucose -0.3 -0.1 N.D. +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.3 N.D. -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 N.D. +0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 N.D. +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 N.D. +0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.6 N.D. -0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.6 N.D. +0.1 +0.0
growth on ypd YPD +0.1 +0.9 N.D. -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +1.2 N.D. -0.1 -0.3
growth on ricinoleic acid YNB Glucose +0.6 +1.2 N.D. -0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +1.5 N.D. -0.2 -0.2
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