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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13417 and 13418 are separated by 246 nucleotides
13418 and 13419 are separated by 259 nucleotides
13419 and 13420 are separated by 184 nucleotides
13420 and 13421 are separated by 349 nucleotides
mRNA_5049: 13417 - HMMPfam-Cytochrome P450-PF00067,SUPERFAMILY--SSF48264, at 1,633,611 to 1,634,725
13417
mRNA_5050: 13418 - Hypothetical Protein, at 1,634,972 to 1,635,708
13418
mRNA_5051: 13419 - KOG1382 Multiple inositol polyphosphate phosphatase, at 1,635,968 to 1,637,866
13419
mRNA_5052: 13420 - Hypothetical Protein, at 1,638,051 to 1,638,624
13420
mRNA_5053: 13421 - Hypothetical Protein, at 1,638,974 to 1,640,272
13421
Group
Condition
mRNA
_5049
mRNA
_5050
mRNA
_5051
mRNA
_5052
mRNA
_5053
13417
13418
13419
13420
13421
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.4
-1.7
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
+0.6
-1.9
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
-0.5
-0.7
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-0.5
-0.5
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
+0.3
-1.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.2
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.0
+0.0
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
+0.3
-0.5
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.2
-0.3
+0.4
+0.1
growth on oleic acid
YNB Glucose
N.D.
-0.2
-0.3
+0.3
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.4
+0.5
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
-0.3
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.3
+0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
-0.2
+0.4
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.1
+0.2
-0.0
auxotrophy
Dropout Complete
N.D.
-0.2
+0.1
+0.4
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
+0.1
+0.2
+0.1
auxotrophy
YNB Glucose
N.D.
+0.1
+0.3
+0.2
-0.1
growth on ypd
YPD
N.D.
-0.0
+0.1
+0.0
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.4
-0.1
+0.5
+0.6
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
+0.0
+0.6
+0.1
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