Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13419 and 13420 are separated by 184 nucleotides
13420 and 13421 are separated by 349 nucleotides
13421 and 13422 are separated by 575 nucleotides
13422 and 13423 are separated by 559 nucleotides
mRNA_5051: 13419 - KOG1382 Multiple inositol polyphosphate phosphatase, at 1,635,968 to 1,637,866
13419
mRNA_5052: 13420 - Hypothetical Protein, at 1,638,051 to 1,638,624
13420
mRNA_5053: 13421 - Hypothetical Protein, at 1,638,974 to 1,640,272
13421
mRNA_5054: 13422 - Hypothetical Protein, at 1,640,848 to 1,641,700
13422
mRNA_5055: 13423 - KOG1289 Amino acid transporters, at 1,642,260 to 1,644,737
13423
Group
Condition
mRNA
_5051
mRNA
_5052
mRNA
_5053
mRNA
_5054
mRNA
_5055
13419
13420
13421
13422
13423
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-1.7
-0.2
+0.5
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-1.1
-0.4
+0.3
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-1.9
-0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.5
-0.2
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.5
+0.6
-1.2
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.7
-0.2
+0.5
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.5
+0.1
-0.4
+0.2
growth on ricinoleic acid
YNB Glucose
-0.4
+0.5
-0.0
-0.6
+0.2
growth on ypd
YPD
+0.1
+0.0
+0.5
-0.7
-0.1
growth on oleic acid
YNB Glucose
-0.3
+0.3
+0.2
-0.3
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.3
+0.2
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.4
+0.1
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.3
+0.1
+0.6
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
-0.0
+0.0
+0.6
auxotrophy
Dropout Complete
+0.1
+0.4
-0.0
-0.2
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
+0.1
+0.8
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
-0.0
+0.6
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.4
+0.1
+0.4
+0.3
auxotrophy
YNB Glucose
+0.3
+0.2
-0.1
+0.2
+0.8
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.6
+0.1
+0.5
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
-0.3
+0.5
+0.7
remove
mRNA_5051
plot
remove
mRNA_5052
plot
remove
mRNA_5053
remove
mRNA_5054
plot
remove
mRNA_5055
plot