Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13422 and 13423 are separated by 559 nucleotides13423 and 13424 are separated by 817 nucleotides13424 and 13425 are separated by 782 nucleotides13425 and 13426 are separated by 218 nucleotides mRNA_5054: 13422 - Hypothetical Protein, at 1,640,848 to 1,641,700 13422 mRNA_5055: 13423 - KOG1289 Amino acid transporters, at 1,642,260 to 1,644,737 13423 mRNA_5056: 13424 - K02137 ATPeF0O, ATP5O, ATP5 F-type H+-transporting ATPase subunit O, at 1,645,555 to 1,646,643 13424 mRNA_5057: 13425 - K03252 EIF3C translation initiation factor 3 subunit C, at 1,647,426 to 1,650,006 13425 mRNA_5058: 13426 - K07249 E1.2.1.36 retinal dehydrogenase, at 1,650,225 to 1,652,548 13426
Group Condition mRNA_5054 mRNA_5055 mRNA_5056 mRNA_5057 mRNA_5058
13422 13423 13424 13425 13426
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.1 N.D. N.D. -2.8
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 -0.5 N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.1 N.D. N.D. -1.2
growth on ricinoleic acid YNB Glucose -0.6 +0.2 N.D. N.D. -0.6
growth on oleic acid YNB Glucose -0.3 +0.0 N.D. N.D. -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.5 N.D. N.D. -0.6
growth on ypd YPD -0.7 -0.1 N.D. N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.3 N.D. N.D. -1.1
facs on lipid accumulation Sorted No BODIPY Gate +0.8 -0.2 N.D. N.D. -0.7
auxotrophy Dropout Complete -0.2 +0.5 N.D. N.D. -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 N.D. N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.2 N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.6 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.0 N.D. N.D. -0.1
auxotrophy YNB Glucose +0.2 +0.8 N.D. N.D. -0.9
ypd buoyancy 40 hrs Low Buoyancy +0.6 +0.0 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.2 N.D. N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.7 N.D. N.D. -0.9
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.2 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.4 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.2 N.D. N.D. +0.4
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