Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13423 and 13424 are separated by 817 nucleotides13424 and 13425 are separated by 782 nucleotides13425 and 13426 are separated by 218 nucleotides13426 and 13427 are separated by 199 nucleotides mRNA_5055: 13423 - KOG1289 Amino acid transporters, at 1,642,260 to 1,644,737 13423 mRNA_5056: 13424 - K02137 ATPeF0O, ATP5O, ATP5 F-type H+-transporting ATPase subunit O, at 1,645,555 to 1,646,643 13424 mRNA_5057: 13425 - K03252 EIF3C translation initiation factor 3 subunit C, at 1,647,426 to 1,650,006 13425 mRNA_5058: 13426 - K07249 E1.2.1.36 retinal dehydrogenase, at 1,650,225 to 1,652,548 13426 mRNA_5059: 13427 - KOG0022 Alcohol dehydrogenase, class III, at 1,652,748 to 1,654,435 13427
Group Condition mRNA_5055 mRNA_5056 mRNA_5057 mRNA_5058 mRNA_5059
13423 13424 13425 13426 13427
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. N.D. -2.8 -0.3
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. -1.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. N.D. -0.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. N.D. -1.1 -0.3
growth on ricinoleic acid YNB Glucose +0.2 N.D. N.D. -0.6 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. N.D. -0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. N.D. -0.7 +0.3
growth on oleic acid YNB Glucose +0.0 N.D. N.D. -0.6 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. -0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.7 N.D. N.D. -0.9 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. N.D. -0.1 +0.3
auxotrophy YNB Glucose +0.8 N.D. N.D. -0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.6 N.D. N.D. -0.6 -0.1
auxotrophy Dropout Complete +0.5 N.D. N.D. -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. N.D. +0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. N.D. -0.1 +0.3
growth on ypd YPD -0.1 N.D. N.D. -0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. -0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 N.D. N.D. -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. +0.4 -0.1
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