Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13425 and 13426 are separated by 218 nucleotides
13426 and 13427 are separated by 199 nucleotides
13427 and 13428 are separated by 245 nucleotides
13428 and 13429 are separated by 192 nucleotides
mRNA_5057: 13425 - K03252 EIF3C translation initiation factor 3 subunit C, at 1,647,426 to 1,650,006
13425
mRNA_5058: 13426 - K07249 E1.2.1.36 retinal dehydrogenase, at 1,650,225 to 1,652,548
13426
mRNA_5059: 13427 - KOG0022 Alcohol dehydrogenase, class III, at 1,652,748 to 1,654,435
13427
mRNA_5060: 13428 - HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756, at 1,654,681 to 1,660,965
13428
mRNA_5061: 13429 - K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4, at 1,661,158 to 1,662,498
13429
Group
Condition
mRNA
_5057
mRNA
_5058
mRNA
_5059
mRNA
_5060
mRNA
_5061
13425
13426
13427
13428
13429
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-2.8
-0.3
+0.2
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
-0.6
-0.5
+0.0
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-1.1
-0.3
+0.2
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.7
+0.3
-0.7
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
-1.2
-0.3
-0.0
+0.2
auxotrophy
YNB Glucose
N.D.
-0.9
-0.2
-0.3
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.6
-0.1
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.9
-0.1
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.4
-0.3
-0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
+0.3
-0.7
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.6
-0.1
-0.2
-0.0
auxotrophy
Dropout Complete
N.D.
-0.5
-0.1
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
-0.2
-0.4
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.6
-0.0
+0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
-0.0
-0.3
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.3
-0.7
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.5
-0.0
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+0.3
-0.4
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.0
+0.3
-0.0
growth on ypd
YPD
N.D.
-0.0
+0.3
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.4
-0.1
+0.0
+0.3
remove
mRNA_5057
plot
remove
mRNA_5058
plot
remove
mRNA_5059
remove
mRNA_5060
plot
remove
mRNA_5061
plot