Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13426 and 13427 are separated by 199 nucleotides13427 and 13428 are separated by 245 nucleotides13428 and 13429 are separated by 192 nucleotides13429 and 13430 are separated by 68 nucleotides mRNA_5058: 13426 - K07249 E1.2.1.36 retinal dehydrogenase, at 1,650,225 to 1,652,548 13426 mRNA_5059: 13427 - KOG0022 Alcohol dehydrogenase, class III, at 1,652,748 to 1,654,435 13427 mRNA_5060: 13428 - HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756, at 1,654,681 to 1,660,965 13428 mRNA_5061: 13429 - K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4, at 1,661,158 to 1,662,498 13429 mRNA_5062: 13430 - HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359, at 1,662,567 to 1,663,555 13430
Group Condition mRNA_5058 mRNA_5059 mRNA_5060 mRNA_5061 mRNA_5062
13426 13427 13428 13429 13430
growth on ricinoleic acid YNB Ricinoleic Acid -2.8 -0.3 +0.2 -0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.6 -0.5 +0.0 -0.6 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 -0.3 +0.2 -0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.7 +0.3 -0.7 -0.3 -0.1
growth on oleic acid YNB Oleic Acid -1.2 -0.3 -0.0 +0.2 -0.2
auxotrophy YNB Glucose -0.9 -0.2 -0.3 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.9 -0.1 -0.3 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.1 -0.3 -0.3 +0.1
auxotrophy Dropout Complete -0.5 -0.1 -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.1 -0.2 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.3 -0.7 -0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.3 -0.3 -0.1 +0.4
growth on oleic acid YNB Glucose -0.6 -0.0 +0.2 +0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 -0.4 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.3 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.3 -0.7 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 +0.1 +0.4 +0.4
growth on ypd YPD -0.0 +0.3 +0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.3 -0.4 +0.4 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 +0.3 -0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.1 +0.0 +0.3 +0.6
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